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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV14073282 hCoV-19/mink/Latvia/6034/2021 EPI_ISL_11826100 RNA virus Severe acute respiratory syndrome coronavirus 2 Latvia 2021-12-09 Neovison vison 29809 2022-04-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID BIOR Ratsupites 1, Riga, LV-1067, Latvia Latvian Biomedical Research and Study Centre 29743 99.78
OEAV14073283 hCoV-19/mink/Latvia/6035/2022 EPI_ISL_11826101 RNA virus Severe acute respiratory syndrome coronavirus 2 Latvia 2022-01-28 Neovison vison 29809 2022-04-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID BIOR Alise Jakovele, Janis Pjalkovskis, Nikita Zrelovs, Monta Briviba, Ivars Silamikelis, Liga Birzniece, Kaspars Megnis, Una Krumina, Guntars Zarins, Vita Rovite, Lauma Freimane, Laila Silamikele, Laura Ansone, Davids Fridmanis, Elina Dimina, Irena Meistere, Laura Krivko,Daina Pule, Jurijs Perevoscikovs, Uga Dumpis, Janis Klovins Latvian Biomedical Research and Study Centre 29710 99.67
OEAV14073285 hCoV-19/mink/Latvia/6037/2022 EPI_ISL_11826445 RNA virus Severe acute respiratory syndrome coronavirus 2 Latvia 2022-01-21 Neovison vison 29858 2022-04-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID BIOR Alise Jakovele, Janis Pjalkovskis, Nikita Zrelovs, Monta Briviba, Ivars Silamikelis, Liga Birzniece, Kaspars Megnis, Una Krumina, Guntars Zarins, Vita Rovite, Lauma Freimane, Laila Silamikele, Laura Ansone, Davids Fridmanis, Elina Dimina, Irena Meistere, Laura Krivko,Daina Pule, Jurijs Perevoscikovs, Uga Dumpis, Janis Klovins Latvian Biomedical Research and Study Centre 29825 99.89
OEAV14073290 hCoV-19/mink/Latvia/6042/2021 EPI_ISL_11827547 RNA virus Severe acute respiratory syndrome coronavirus 2 Latvia 2021-11-16 Neovison vison 29868 2022-04-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID BIOR Alise Jakovele, Janis Pjalkovskis, Nikita Zrelovs, Monta Briviba, Ivars Silamikelis, Liga Birzniece, Kaspars Megnis, Una Krumina, Guntars Zarins, Vita Rovite, Lauma Freimane, Laila Silamikele, Laura Ansone, Davids Fridmanis, Elina Dimina, Irena Meistere, Laura Krivko,Daina Pule, Jurijs Perevoscikovs, Uga Dumpis, Janis Klovins Latvian Biomedical Research and Study Centre 29798 99.77
OEAV14073293 hCoV-19/mink/Latvia/6045/2021 EPI_ISL_11827576 RNA virus Severe acute respiratory syndrome coronavirus 2 Latvia 2021-11-16 Neovison vison 29868 2022-04-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID BIOR Alise Jakovele, Janis Pjalkovskis, Nikita Zrelovs, Monta Briviba, Ivars Silamikelis, Liga Birzniece, Kaspars Megnis, Una Krumina, Guntars Zarins, Vita Rovite, Lauma Freimane, Laila Silamikele, Laura Ansone, Davids Fridmanis, Elina Dimina, Irena Meistere, Laura Krivko,Daina Pule, Jurijs Perevoscikovs, Uga Dumpis, Janis Klovins Latvian Biomedical Research and Study Centre 29828 99.87
OEAV14073294 hCoV-19/mink/Latvia/6046/2021 EPI_ISL_11827583 RNA virus Severe acute respiratory syndrome coronavirus 2 Latvia 2021-11-16 Neovison vison 29866 2022-04-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID BIOR Alise Jakovele, Janis Pjalkovskis, Nikita Zrelovs, Monta Briviba, Ivars Silamikelis, Liga Birzniece, Kaspars Megnis, Una Krumina, Guntars Zarins, Vita Rovite, Lauma Freimane, Laila Silamikele, Laura Ansone, Davids Fridmanis, Elina Dimina, Irena Meistere, Laura Krivko,Daina Pule, Jurijs Perevoscikovs, Uga Dumpis, Janis Klovins Latvian Biomedical Research and Study Centre 29866 100.00
OEAV14073295 hCoV-19/mink/Latvia/6047/2021 EPI_ISL_11827615 RNA virus Severe acute respiratory syndrome coronavirus 2 Latvia 2021-11-16 Neovison vison 29868 2022-04-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID BIOR Alise Jakovele, Janis Pjalkovskis, Nikita Zrelovs, Monta Briviba, Ivars Silamikelis, Liga Birzniece, Kaspars Megnis, Una Krumina, Guntars Zarins, Vita Rovite, Lauma Freimane, Laila Silamikele, Laura Ansone, Davids Fridmanis, Elina Dimina, Irena Meistere, Laura Krivko,Daina Pule, Jurijs Perevoscikovs, Uga Dumpis, Janis Klovins Latvian Biomedical Research and Study Centre 29586 99.06
OEAV14073300 hCoV-19/mink/Latvia/6052/2021 EPI_ISL_11828282 RNA virus Severe acute respiratory syndrome coronavirus 2 Latvia 2021-11-16 Neovison vison 29868 2022-04-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID BIOR Alise Jakovele, Janis Pjalkovskis, Nikita Zrelovs, Monta Briviba, Ivars Silamikelis, Liga Birzniece, Kaspars Megnis, Una Krumina, Guntars Zarins, Vita Rovite, Lauma Freimane, Laila Silamikele, Laura Ansone, Davids Fridmanis, Elina Dimina, Irena Meistere, Laura Krivko,Daina Pule, Jurijs Perevoscikovs, Uga Dumpis, Janis Klovins Latvian Biomedical Research and Study Centre 29868 100.00
OEAV14073301 hCoV-19/mink/Latvia/6053/2021 EPI_ISL_11828393 RNA virus Severe acute respiratory syndrome coronavirus 2 Latvia 2021-11-16 Neovison vison 29863 2022-04-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID BIOR Alise Jakovele, Janis Pjalkovskis, Nikita Zrelovs, Monta Briviba, Ivars Silamikelis, Liga Birzniece, Kaspars Megnis, Una Krumina, Guntars Zarins, Vita Rovite, Lauma Freimane, Laila Silamikele, Laura Ansone, Davids Fridmanis, Elina Dimina, Irena Meistere, Laura Krivko,Daina Pule, Jurijs Perevoscikovs, Uga Dumpis, Janis Klovins Latvian Biomedical Research and Study Centre 29787 99.75
OEAV14073302 hCoV-19/mink/Latvia/6054/2022 EPI_ISL_11828412 RNA virus Severe acute respiratory syndrome coronavirus 2 Latvia 2022-01-21 Neovison vison 29858 2022-04-07 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID BIOR Alise Jakovele, Janis Pjalkovskis, Nikita Zrelovs, Monta Briviba, Ivars Silamikelis, Liga Birzniece, Kaspars Megnis, Una Krumina, Guntars Zarins, Vita Rovite, Lauma Freimane, Laila Silamikele, Laura Ansone, Davids Fridmanis, Elina Dimina, Irena Meistere, Laura Krivko,Daina Pule, Jurijs Perevoscikovs, Uga Dumpis, Janis Klovins Latvian Biomedical Research and Study Centre 29858 100.00
OEAV14820613 SARS-CoV-2/Neovison vison/NLD/NB68-12/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes OM758330 RNA viruses Severe acute respiratory syndrome coronavirus 2 Netherlands 2020-11-03 Neogale vison 29833 2022-04-21 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Vreeman,S., Molenaar,R.-J., van den Brand,J., Hakze-van der Honing,R.W. and van de Poel,W.H.M. Virology, WBVR, Houtribweg 39, Lelystad, Flevoland 8221 RA 29680 99.49
OEAV14820614 SARS-CoV-2/Neovison vison/NLD/NB68-15/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes OM758333 RNA viruses Severe acute respiratory syndrome coronavirus 2 Netherlands 2020-11-03 Neogale vison 29833 2022-04-21 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Vreeman,S., Molenaar,R.-J., van den Brand,J., Hakze-van der Honing,R.W. and van de Poel,W.H.M. Virology, WBVR, Houtribweg 39, Lelystad, Flevoland 8221 RA 29639 99.35
OEAV14820615 SARS-CoV-2/Neovison vison/NLD/NB68-18/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes OM758332 RNA viruses Severe acute respiratory syndrome coronavirus 2 Netherlands 2020-11-03 Neogale vison 29833 2022-04-21 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Vreeman,S., Molenaar,R.-J., van den Brand,J., Hakze-van der Honing,R.W. and van de Poel,W.H.M. Virology, WBVR, Houtribweg 39, Lelystad, Flevoland 8221 RA 29680 99.49
OEAV14820616 SARS-CoV-2/Neovison vison/NLD/NB68-20/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes OM758335 RNA viruses Severe acute respiratory syndrome coronavirus 2 Netherlands 2020-11-03 Neogale vison 29833 2022-04-21 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Vreeman,S., Molenaar,R.-J., van den Brand,J., Hakze-van der Honing,R.W. and van de Poel,W.H.M. Virology, WBVR, Houtribweg 39, Lelystad, Flevoland 8221 RA 29680 99.49
OEAV14820618 SARS-CoV-2/Neovison vison/NLD/NB68-26-RS/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes OM758338 RNA viruses Severe acute respiratory syndrome coronavirus 2 Netherlands 2020-11-03 Neogale vison 29833 2022-04-21 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Vreeman,S., Molenaar,R.-J., van den Brand,J., Hakze-van der Honing,R.W. and van de Poel,W.H.M. Virology, WBVR, Houtribweg 39, Lelystad, Flevoland 8221 RA 29640 99.35
OEAV14820619 SARS-CoV-2/Neovison vison/NLD/NB68-26-TS/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes OM758337 RNA viruses Severe acute respiratory syndrome coronavirus 2 Netherlands 2020-11-03 Neogale vison 29833 2022-04-21 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Vreeman,S., Molenaar,R.-J., van den Brand,J., Hakze-van der Honing,R.W. and van de Poel,W.H.M. Virology, WBVR, Houtribweg 39, Lelystad, Flevoland 8221 RA 29681 99.49
OEAV14820620 SARS-CoV-2/Neovison vison/NLD/NB68-27-TS/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes OM758339 RNA viruses Severe acute respiratory syndrome coronavirus 2 Netherlands 2020-11-03 Neogale vison 29833 2022-04-21 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Vreeman,S., Molenaar,R.-J., van den Brand,J., Hakze-van der Honing,R.W. and van de Poel,W.H.M. Virology, WBVR, Houtribweg 39, Lelystad, Flevoland 8221 RA 29680 99.49
OEAV14820623 SARS-CoV-2/Neovison vison/NLD/NB68-35-RS/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), and membrane glycoprotein (M) genes, complete cds; ORF6 protein (ORF6) gene, partial cds; and ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes OM758345 RNA viruses Severe acute respiratory syndrome coronavirus 2 Netherlands 2020-11-03 Neogale vison 29833 2022-04-21 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Vreeman,S., Molenaar,R.-J., van den Brand,J., Hakze-van der Honing,R.W. and van de Poel,W.H.M. Virology, WBVR, Houtribweg 39, Lelystad, Flevoland 8221 RA 29484 98.83
OEAV14820625 SARS-CoV-2/Neovison vison/NLD/NB68-39-TS/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes OM758349 RNA viruses Severe acute respiratory syndrome coronavirus 2 Netherlands 2020-11-03 Neogale vison 29833 2022-04-21 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Vreeman,S., Molenaar,R.-J., van den Brand,J., Hakze-van der Honing,R.W. and van de Poel,W.H.M. Virology, WBVR, Houtribweg 39, Lelystad, Flevoland 8221 RA 29683 99.50
OEAV14820626 SARS-CoV-2/Neovison vison/NLD/NB68-41-RS/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes OM758358 RNA viruses Severe acute respiratory syndrome coronavirus 2 Netherlands 2020-11-03 Neogale vison 29833 2022-04-21 feces 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Vreeman,S., Molenaar,R.-J., van den Brand,J., Hakze-van der Honing,R.W. and van de Poel,W.H.M. Virology, WBVR, Houtribweg 39, Lelystad, Flevoland 8221 RA 29607 99.24
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